Entries by Jonathan McLatchie

Replicating DNA with Extraordinary Fidelity: Meet DNA Polymerase

In a previous article, I gave a brief overview of the complex molecular mechanisms governing DNA replication. Now, I will focus specifically on the replication enzyme DNA polymerase. DNA polymerase is the enzyme responsible for synthesizing new strands of DNA, complementary to the sequence of the template strand. The unidirectional DNA polymerase progresses along the template […]

DNA Replication: An Engineering Marvel

Recently I have been reviewing some literature on the elegant molecular mechanisms by which DNA is replicated. As an undergraduate biology student, I recall being struck by their sheer complexity, sophistication, and intrinsic beauty. As I read about such a carefully orchestrated process, involving so many specific enzymes and protein complexes, and its extraordinary accuracy, […]

Intergenic Retrotransposons Can Serve Long-Range Functions

Retrotransposons (which include LINEs, SINEs, and ERVs) are known for the ability of their long-terminal repeats (LTRs) to serve as promoters and enhancers for regulating the expression of genes that are immediately downstream (Conley et al., 2008; Dunn et al., 2005). The majority of retrotransposons, however, are located considerable distances from genes (often hundreds of kilobases away) — […]

The Design of the Complement Cascade

When I was an undergraduate biology student, one of my favorite topics was the complement system in immunology. The complement cascade is an array of sequentially interacting proteins that serve a vital role in innate immune responses. The complement cascade can be activated via interactions with antibody-antigen complexes. Proteins involved in the complement cascade react […]

Asteroid Belts and Planet Biohabitability

  A new study by Rebecca Martin of the University of Colorado finds that “Solar systems with life-bearing planets may be rare if they are dependent on the presence of asteroid belts of just the right mass.” Science Daily summarizes: “They suggest that the size and location of an asteroid belt, shaped by the evolution of the […]

The Molecular "Clutch" of the Dynein Motor Protein

Over at Evolution News & Views, I have just published a blog post on the recent paper in the journal Cell regarding the molecular clutch of the dynein motor protein: Here at ENV, I have previously described the molecular flagellar clutch of Bacillus subtilis, the grass or hay bacillus, which allows the bacterium to cease […]

On the Origin of Protein Folds

A common objection to the theory of intelligent design (ID) is that it has no power to make testable predictions, and thus there is no basis for calling it science at all. While recognising that testability may not be a sufficient or necessary resolution of the “Demarcation Problem”, this article will consider one prediction made […]